MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Lactobacillus brevis KB290 plasmid pKB290-6 DNA

Total Repeats: 73

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020827	CT	3	6	10	15	0 %	50 %	0 %	50 %	Non-Coding
2	NC_020827	CTT	2	6	48	53	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_020827	AAC	2	6	114	119	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_020827	TTTA	2	8	189	196	25 %	75 %	0 %	0 %	Non-Coding
5	NC_020827	A	7	7	424	430	100 %	0 %	0 %	0 %	Non-Coding
6	NC_020827	CTA	2	6	447	452	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_020827	TAG	2	6	557	562	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_020827	CTA	2	6	569	574	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9	NC_020827	T	6	6	3959	3964	0 %	100 %	0 %	0 %	Non-Coding
10	NC_020827	CT	3	6	3967	3972	0 %	50 %	0 %	50 %	Non-Coding
11	NC_020827	TTC	2	6	4041	4046	0 %	66.67 %	0 %	33.33 %	Non-Coding
12	NC_020827	AGT	2	6	4140	4145	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13	NC_020827	ATT	2	6	4166	4171	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_020827	ATT	2	6	4244	4249	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_020827	TGG	2	6	4276	4281	0 %	33.33 %	66.67 %	0 %	Non-Coding
16	NC_020827	GCT	2	6	4340	4345	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17	NC_020827	GTT	2	6	4404	4409	0 %	66.67 %	33.33 %	0 %	Non-Coding
18	NC_020827	TA	3	6	4412	4417	50 %	50 %	0 %	0 %	Non-Coding
19	NC_020827	GATA	2	8	4444	4451	50 %	25 %	25 %	0 %	Non-Coding
20	NC_020827	A	6	6	4464	4469	100 %	0 %	0 %	0 %	Non-Coding
21	NC_020827	TA	3	6	4479	4484	50 %	50 %	0 %	0 %	Non-Coding
22	NC_020827	TA	3	6	4515	4520	50 %	50 %	0 %	0 %	Non-Coding
23	NC_020827	A	6	6	4680	4685	100 %	0 %	0 %	0 %	Non-Coding
24	NC_020827	GTCT	2	8	5332	5339	0 %	50 %	25 %	25 %	Non-Coding
25	NC_020827	TACTT	2	10	5398	5407	20 %	60 %	0 %	20 %	Non-Coding
26	NC_020827	CTA	2	6	5447	5452	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
27	NC_020827	TA	3	6	5451	5456	50 %	50 %	0 %	0 %	Non-Coding
28	NC_020827	AAC	2	6	5519	5524	66.67 %	0 %	0 %	33.33 %	Non-Coding
29	NC_020827	G	7	7	6187	6193	0 %	0 %	100 %	0 %	Non-Coding
30	NC_020827	A	8	8	6202	6209	100 %	0 %	0 %	0 %	Non-Coding
31	NC_020827	GTA	2	6	6241	6246	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
32	NC_020827	AAT	2	6	6267	6272	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_020827	CCTT	2	8	6276	6283	0 %	50 %	0 %	50 %	Non-Coding
34	NC_020827	CTT	2	6	6328	6333	0 %	66.67 %	0 %	33.33 %	Non-Coding
35	NC_020827	CTT	2	6	6340	6345	0 %	66.67 %	0 %	33.33 %	Non-Coding
36	NC_020827	ATA	2	6	6380	6385	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_020827	CAA	2	6	6474	6479	66.67 %	0 %	0 %	33.33 %	Non-Coding
38	NC_020827	TTACA	2	10	6543	6552	40 %	40 %	0 %	20 %	Non-Coding
39	NC_020827	CGG	2	6	8438	8443	0 %	0 %	66.67 %	33.33 %	Non-Coding
40	NC_020827	GAGC	2	8	8455	8462	25 %	0 %	50 %	25 %	Non-Coding
41	NC_020827	GCGTA	2	10	8489	8498	20 %	20 %	40 %	20 %	Non-Coding
42	NC_020827	TGA	2	6	8612	8617	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
43	NC_020827	AAAC	2	8	8628	8635	75 %	0 %	0 %	25 %	Non-Coding
44	NC_020827	GAA	2	6	8667	8672	66.67 %	0 %	33.33 %	0 %	Non-Coding
45	NC_020827	CAA	2	6	8724	8729	66.67 %	0 %	0 %	33.33 %	Non-Coding
46	NC_020827	AAC	2	6	8737	8742	66.67 %	0 %	0 %	33.33 %	Non-Coding
47	NC_020827	T	6	6	9275	9280	0 %	100 %	0 %	0 %	Non-Coding
48	NC_020827	AGG	2	6	9349	9354	33.33 %	0 %	66.67 %	0 %	Non-Coding
49	NC_020827	A	6	6	9366	9371	100 %	0 %	0 %	0 %	Non-Coding
50	NC_020827	TAT	2	6	9374	9379	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_020827	T	6	6	9479	9484	0 %	100 %	0 %	0 %	Non-Coding
52	NC_020827	AATA	2	8	9548	9555	75 %	25 %	0 %	0 %	Non-Coding
53	NC_020827	AAG	2	6	9685	9690	66.67 %	0 %	33.33 %	0 %	Non-Coding
54	NC_020827	CTT	2	6	9715	9720	0 %	66.67 %	0 %	33.33 %	Non-Coding
55	NC_020827	T	6	6	9723	9728	0 %	100 %	0 %	0 %	Non-Coding
56	NC_020827	A	6	6	9750	9755	100 %	0 %	0 %	0 %	Non-Coding
57	NC_020827	ATA	2	6	9765	9770	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_020827	CAC	2	6	9784	9789	33.33 %	0 %	0 %	66.67 %	Non-Coding
59	NC_020827	AT	3	6	9827	9832	50 %	50 %	0 %	0 %	Non-Coding
60	NC_020827	CAA	2	6	9856	9861	66.67 %	0 %	0 %	33.33 %	Non-Coding
61	NC_020827	ACC	2	6	9872	9877	33.33 %	0 %	0 %	66.67 %	Non-Coding
62	NC_020827	AAAAAT	2	12	9878	9889	83.33 %	16.67 %	0 %	0 %	Non-Coding
63	NC_020827	ACT	2	6	9916	9921	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
64	NC_020827	TAA	2	6	9953	9958	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_020827	TAAA	2	8	9984	9991	75 %	25 %	0 %	0 %	Non-Coding
66	NC_020827	CAT	2	6	10024	10029	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
67	NC_020827	C	7	7	10033	10039	0 %	0 %	0 %	100 %	Non-Coding
68	NC_020827	TAC	2	6	10055	10060	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
69	NC_020827	AGCT	2	8	10135	10142	25 %	25 %	25 %	25 %	Non-Coding
70	NC_020827	T	6	6	10979	10984	0 %	100 %	0 %	0 %	Non-Coding
71	NC_020827	AGA	2	6	11390	11395	66.67 %	0 %	33.33 %	0 %	Non-Coding
72	NC_020827	TAA	2	6	11461	11466	66.67 %	33.33 %	0 %	0 %	Non-Coding
73	NC_020827	GGT	2	6	11545	11550	0 %	33.33 %	66.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.